Workshop Materials

Our workshop materials are openly licensed and freely available on Github. We currently have the following modules.

Intro to R and tidyverse

A brief introduction to using R programming language and the tidyverse package in context of gene expression data.

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Bulk RNA-Seq

Learn how to process bulk RNA-seq data and apply commonly used analysis techniques like differential expression.

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scRNA-Seq

Learn how to process different types of scRNA-seq data and analyze them.

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Machine Learning

Learn to apply machine learning techniques like clustering to gene expression data.

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Pathway Analysis

This Data Lab-designed module introduces training participants to three kinds of pathway analysis: over-representation analysis (ORA), Gene Set Enrichment Analysis (GSEA), and Gene Set Variation Analysis (GSVA).

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Run your own workshop

Are you interested in using our workshop materials to teach colleagues or members of your lab the data skills needed to examine their own data? We can help get you started. Please contacts us at training@ccdatalab.org